XpressPure NGS size selection and clean-up beads offer a simple and reliable selection of DNA libraries for different NGS workflows with high recovery comparable to the leading kits available in the market.
The system uses MagGenome’s proprietary chemistry involving reversible nucleic acid-binding properties of magnetic beads. This property allows the beads to selectively bind fragments of a specific size range viz 150-800 bp and so eliminates fragment sizes outside this range.
In addition, the binding of the beads to narrow size ranges is based on the use of different sample to bead ratios, thus offering the customer accurate single or double-sided size selection, also assuring a more consistent performance between experiments.
Finally, we have tested the compatibility and performance of XpressPure Size Select beads with different NGS library preparation kits and demonstrated results comparable to the AMPure XP beads.
1.Comparison of library profiles from XpressPure and AMPure XP size selection beads
Figure1: Tape station profile of final libraries having expected size distribution of 400-500bp. Libraries were prepared from 300bp Covaris DNA fragments using NEB Next Ultra DNA Library kit (cat#E7370L). AMPure XP beads used in the kit protocol was substituted with XpressPure Size Select beads so that a head-to-head comparison of the performance could be made.
2.Reproducibility across multiple experiments:
Figure 2: XpressPure Size Select Bead showed consistent yield and library size distributions across different experiments as shown in the tape station profile of final library (400bp-500bp) prepared from 300 bp Covaris DNA fragments using NEB Next Ultra DNA Library kit (cat#E7370L).
3.XpressPure performs optimally when used at (1.8x) bead to library ratio.
Figure3: Tape station profile showing XpressPure Size Select bead capture efficiency of Covaris DNA fragment (200 bp) using 1.8x sample to bead ratio ensuring the optimal performance of the bead in this ratio (as recommended by AMPure XP).
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